Epigenomics - Germline Methylation Variation

In the following table the methylation data from CpG island arrays (Flanagan et al., 2005 submitted) are available. The graphs are in a format readable by the UCSC Genome browser. The Genome Browser zooms and scrolls over chromosomes, showing the data in a seperate track next to CpG islands, CpG density and known genes. By clicking on the links, the Genome browser opens automatically, displaying a specific area of a given chromosome (browser start position). From there, the sequence can be explored up- and downstream.

#	Chromosome	Browser Start Postition
1	Chr 1	chr1:1-24 5,522,847 bp
2	Chr 2	chr2:1-24 3,018,229 bp
3	Chr 3	chr3:1-19 9,505,740 bp
4	Chr 4	chr4:1-19 1,411,218 bp
5	Chr 5	chr5:1-18 0,857,866 bp
6	Chr 6	chr6:1-17 0,975,699 bp
7	Chr 7	chr7:1-15 8,628,139 bp
8	Chr 8	chr8:1-14 6,274,826 bp
9	Chr 9	chr9:1-13 8,429,268 bp
10	Chr 10	chr10:1 -135,413,628 bp
11	Chr 11	chr11:1 -134,452,384 bp
12	Chr 12	chr12:1 -132,449,811 bp
13	Chr 13	chr13:1 -114,142,980 bp
14	Chr 14	chr14:1 -106,368,585 bp
15	Chr 15	chr15:1 -100,338,915 bp
16	Chr 16	chr16:1- 88,827,254 bp
17	Chr 17	chr17:1- 78,774,742 bp
18	Chr 18	chr18:1- 76,117,153 bp
19	Chr 19	chr19:1- 63,811,651 bp
20	Chr 20	chr20:1- 62,435,964 bp
21	Chr 21	chr21:1- 46,944,323 bp
22	Chr 22	chr22:1- 49,554,710 bp
23	Chr X	chrX:1-15 4,824,264 bp
24	Chr Y	chrY:1-57, 701,691 bp

Notes: All maps are based on the May 2004 version of the human genome draft. The May 2004 human reference sequence is based on NCBI Build 35. It has been released in conjunction with the International Human Genome Sequencing Consortium's announcement of the successful completion of the Human Genome Project.
This reference sequence covers about 99 percent of the human genome's gene-containing regions, and has been sequenced to an accuracy of 99.99 percent. The missing portions are essentially contained in less than 400 defined gaps that represent DNA regions with unusual structures that can't be reliably sequenced using current technology.

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